To determine the optimum pH for two different proteolytic enzymes.

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Biology Laboratory Report 3                6S LUK KA CHEONG (28)

                7/11/2003

To determine the optimum pH for two different proteolytic enzymes

Introduction

                                In this experiment, the substrate is the gelatin coating the strip of photographic film.

Apparatus and Materials

Test tube                                        x        15

Thermometer                                x        1

                                Fifteen strips of photographic film

Water bath

                                Buffer solutions at various pH values(1, 3, 4, 7, 9)

Hypothesis

                                Enzymes are protein molecules that act as catalysts in biochemical reactions. They are denatured. Enzyme is reusable, they are not consumed in a reaction. The functioning of the enzyme is determined by the shape of the protein. The arrangement of molecules on the enzyme produces an area known as the active site within which the specific substrate(s) will "fit". It recognizes, confines and orients the substrate in a particular direction. The use of enzymes can lower the activation energy of a reaction. Changes in pH will also denature the enzyme by changing the shape of the enzyme. Enzymes are also adapted to operate at a specific pH or pH range.

Rate of enzymatic reaction =

Each enzyme has a range of pH at which it is active as well as an optimum pH at which it is most active. The optimum pH of each enzyme is represented by the crest of the graph of enzymatic reaction against pH of buffer solution. Buffer solution is a solution which resists the change in its pH value by adding acid, base or upon dilution, so as to maintain pH values within narrow limits by absorbing or releasing hydrogen ions. It is classified as acidic buffer and alkaline buffer. Acidic buffer is a large amount of weak acid and its salt, while alkaline buffer is a large amount of weak base and its salt. pH is the negative logarithm of the H+ ion concentration. It is a measure of the acidity or basic character of a solution. Since it measures a fraction, the larger the pH number, the less H ions are present in a solution. Pepsin is an enzyme produced from pepsinogen that initiates protein digestion by breaking down protein into large peptide fragments. An enzyme, produced by the stomach, that chemically breaks down peptide bonds in polypeptides and proteins. Its optimum pH should be 2. Trypsin is an enzyme produced from trypsinogen when activated by enterokinase from the intestinal wall. It hydrolyses proteins into peptides and activates another protease in the secretion, chymotrypsinogen into chymotrypsin. Its optimum pH should be 10. Distilled water is used in Group3 because it acts as a control experiment to show that the disappearance of gelatin on film is done by enzyme (i.e. pepsin and trypsin). Gelatin is produced by the thermal denaturation of collagen, isolated from animal skin and bones, with very dilute acid. Gelatin is primarily used as a gelling agent forming transparent elastic thermoreversible gels on cooling below about 35°C, which dissolve at low temperature to give 'melt in the mouth' products with useful flavor-release. In addition, the amphiphilic nature of the molecules endow  them with useful emulsification (e.g. whipped cream) and foam-stabilizing properties (e.g. mallow foam). On dehydration, irreversible conformational changes take place that may be utilized in the formation of surface films.

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Procedure

  1. A water bath was set up and the temperature was adjusted to 37. The constancy of temperature was checked with a thermometer.
  2. 3 ml each of buffer solution of pH 1.0 was pipetted in to three labeled test tubes. This step was repeated for other buffer solutions. Thus, a total of fifteen test tubes (A1, A2, A3 / B1, B2, B3 / C1, C2, C3 / D1, D2, D3 / E1, E2 ,E3) of buffer solutions were prepared.
  3. The tubes were divided into three groups (Group1: A1, B1, C1, D1, E1 / Group2: A2, B2, C2, ...

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**** A very good experimental plan. The author has a clear understanding of enzyme theory, but more complete and detailed explanations in places would reinforce this.